A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
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NDB ID: PRV020  PDB ID: 1A34 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A1:U9_C1.054-0.4890.247-17.4424.339-3.951
12B_A3:U7_C-0.205-0.180.047.986-11.004-1.243
13B_A4:U6_C-0.297-0.157-0.0735.355-6.325-0.15
14B_A5:U5_C-0.538-0.044-0.186-4.583-12.7071.867
15B_A6:U4_C-0.190.017-0.118-7.009-13.2271.516
16B_A7:U3_C0.8720.0740.079-8.746-12.9996.911
17B_A8:U2_C0.607-0.099-0.027-13.458-14.66411.331
18B_A9:U1_C1.11-1.173-1.054-4.5334.8271.044

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.