1AM0: Base Pair Morphology Step Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Mar-2023 number of released structures: 12686

Search for released structures

NDB ID: 1AM0 PDB ID: 1AM0

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_G6G7:G11C35_AA	-3.289	-2.085	3.179	8.25	0.104	81.726	-1.59	2.697	2.893	0.079	-6.29	82.068
1	2	AA_G17U18:A33G34_AA	-1.705	0.134	3.094	5.655	20.738	-27.704	-3.326	-1.994	2.661	-37.054	10.104	-34.935

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.