A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: PRV008  PDB ID: 1AQ3 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11R_A3:U17_R-0.405-0.4290.4355.491-19.3673.959
13R_G5:C15_R-0.873-0.534-0.03411.017-5.491-0.544
14R_G7:C14_R-1.125-0.5540.2113.194-8.923-3.718
15R_G8:C13_R-1.0250.035-0.0853.1484.3913.656
12R_U4:A16_R0.061-0.4120.233-2.171-13.7151.493
16S_G5:C15_S-0.71-0.4220.4973.412-18.568-1.65
17S_G7:C14_S-0.607-0.122-0.107-6.174-11.478-4.317
18S_G8:C13_S0.286-0.060.1257.77-1.203-4.5

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.