A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 1B69  PDB ID: 1B69 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12B_DA102:DT125_C0.152-0.213-1.2-21.095-10.16213.214
15B_DA105:DT122_C0.4070.068-0.177-13.34-22.768-4.373
18B_DA108:DT119_C0.133-0.234-0.958-9.529-16.74111.802
19B_DA109:DT118_C-0.137-0.329-0.756-6.903-9.7873.504
110B_DA110:DT117_C0.364-0.308-1.214-1.584-9.1237.781
113B_DC113:DG114_C0.155-0.10.43-9.5934.1141.277
11B_DG101:DC126_C0.61-0.045-0.32332.3190.2527.162
13B_DG103:DC124_C0.067-0.074-0.777-15.2731.9182.513
16B_DG106:DC121_C0.029-0.187-0.624-1.9217.664-0.42
14B_DT104:DA123_C-0.289-0.0110.09-6.299-16.172.687
17B_DT107:DA120_C0.227-0.198-0.2292.18-11.6610.272
111B_DT111:DA116_C-0.562-0.207-1.0338.52-6.955-3.228
112B_DT112:DA115_C-0.201-0.008-0.1233.146-7.5854.738

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.