A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 16-Oct-2019 number of released structures: 10422
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NDB ID: PD0039  PDB ID: 1B96 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11CC_DA2DA3:DT10DT11_DD-0.0260.9152.772-7.6492.27733.791.235-0.9632.7663.85112.93634.693
12CC_DA3DG4:DC9DT10_DD0.459-0.2272.929-4.5942.01233.566-0.675-1.4392.8263.4597.933.928
14CC_DA5DT6:DA7DT8_DD0.207-1.3133.2792.3453.45326.648-3.6790.1433.0937.433-5.04826.967
16CC_DA7DT8:DA5DT6_DD-0.13-1.4193.299-3.6670.86730.783-2.822-0.4673.2521.6256.87531.007
18CC_DC9DT10:DA3DG4_DD-0.6360.2063.2062.2922.31633.061-0.0181.4863.1624.058-4.01533.217
13CC_DG4DA5:DT8DC9_DD-0.312-0.5373.818-0.689-18.87338.8121.5350.3433.692-26.5730.97143.003
15CC_DT6DA7:DT6DA7_DD0.026-1.3424.094-2.30354.20329.087-4.155-0.1460.85863.832.71261.032
17CC_DT8DC9:DG4DA5_DD0.173-0.7863.55.193-15.03738.3090.6960.383.547-21.802-7.5341.366
19CC_DT10DT11:DA2DA3_DD-0.3960.7353.1131.8922.64935.1970.8370.9193.1334.369-3.12135.342

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.