A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 1BAU  PDB ID: 1BAU 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14A_A4:U20_A0.053-0.059-0.427-2.835-12.053-6.203
15A_A5:U19_A0.0210.0610.38925.27-6.241-4.092
13A_C3:G21_A0.636-0.240.204-6.6984.4040.632
11A_G1:C23_A-0.33-0.182-0.191-15.175-17.580.761
12A_G2:C22_A-0.118-0.038-0.363-30.216-13.579-3.038
17A_G7:C17_A3.543-1.605-1.55750.336-5.59220.777
16A_U6:G18_A2.254-0.45-0.69437.852-24.801-5.908
18B_A9:A16_A-5.5871.053-0.911-43.60546.95288.914
114B_A16:A9_A5.1130.672-0.55942.73345.05689.808
110B_C11:G14_A-1.067-0.723-0.29316.381-8.893-9.791
112B_C13:G12_A-0.008-1.1510.714-2.309-0.2211.538
113B_C15:G10_A0.997-0.9171.296-6.6850.5323.417
115B_C17:G7_B-3.543-1.605-1.557-50.345-5.58420.761
120B_C22:G2_B0.118-0.038-0.36530.23-13.57-3.049
121B_C23:G1_B0.33-0.182-0.19115.165-17.5740.755
19B_G10:C15_A-1.209-0.3940.9466.5392.0461.828
111B_G12:C13_A0.617-0.990.6954.4610.15311.309
116B_G18:U6_B-2.253-0.45-0.694-37.862-24.81-5.923
119B_G21:C3_B-0.636-0.240.2036.6854.3920.63
117B_U19:A5_B-0.0210.0610.389-25.279-6.219-4.087
118B_U20:A4_B-0.053-0.059-0.4272.804-12.016-6.205

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.