A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 1BZ3  PDB ID: 1BZ3 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A29:U41_A-0.519-0.62-1.244-4.6725.754-8.856
15A_A31:U39_A-1.083-0.3370.4250.451-21.434-1.422
12A_C28:G42_A0.968-0.5420.3452.411-16.629-5.966
16A_C32:A38_A1.42-0.5520.7633.994-15.7860.228
14A_G30:C40_A0.601-0.124-0.203-0.897-21.5263.087
11A_U27:A43_A-0.901-0.147-0.392-12.464-11.9061.008
17A_U33:A37_A-0.733-0.0080.17631.339-27.5061.262

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.