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As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0019  PDB ID: 1C0A 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
113B_5MU654:A658_B4.428-2.3390.354-7.73410.691-101.947
13B_A603:U670_B-0.155-0.193-0.231-7.137-5.8345.22
126B_A614:4SU608_B-4.102-2.2650.3112.7787.524-99.106
118B_A641:U629_B0.3550.0980.0190.4572.2466.877
15B_C605:G668_B0.186-0.2110.275-2.218-13.881-0.013
125B_C613:G622_B0.576-0.380.22-1.997-5.1511.745
115B_C638:C632_B-4.161-1.684-0.06513.178-5.61-0.38
117B_C640:G630_B0.351-0.2530.0977.916-0.4495.001
19B_C650:G664_B0.169-0.3160.0533.727-13.3552.985
11B_G601:C672_B-0.431-0.207-0.166-1.8242.796-0.366
12B_G602:C671_B-0.393-0.231-0.271-12.617-13.2094.892
14B_G604:U669_B-2.289-0.620.351-0.629-10.8421.297
16B_G606:C667_B-0.404-0.377-0.159-7.449-12.4970.663
17B_G607:C666_B-0.133-0.277-0.102-7.183-5.937-1.112
122B_G610:U625_B-2.581-0.938-0.104-3.191-16.867-1.24
127B_G615:C648_B0.3433.9720.35-2.1555.589156.709
128B_G619:C656_B-0.245-0.020.136-17.541-13.2171.277
116B_G639:C631_B-1.0720.258-0.0117.474-8.0248.545
119B_G642:C628_B0.1970.182-0.254-13.349-9.5616.403
120B_G643:C627_B-0.0350.055-0.086-26.414-18.5642.102
121B_G644:A626_B-0.4691.4140.134-25.389-18.76-21.785
18B_G649:PSU665_B-2.315-0.5820.0771.968-5.995-3.569
110B_G651:C663_B-0.587-0.166-0.178-5.438-7.9915.233
111B_G652:C662_B0.08-0.242-0.129-7.219-13.0312.296
112B_G653:C661_B0.017-0.089-0.34-16.609-9.965.342
114B_PSU655:G618_B0.694-5.4640.13612.81115.239-97.552
123B_U611:A624_B-0.131-0.2040.031-7.003-20.5725.665
124B_U612:A623_B0.008-0.1820.053-11.746-12.1570.275

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.