1C0A: Base Pair Morphology Step Parameters

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As of 23-Nov-2022 number of released structures: 12471

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NDB ID: PR0019 PDB ID: 1C0A

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	13	BB_5MU654PSU655:G618A658_BB	1.966	-2.154	3.306	5.961	1.16	32.804	-3.957	-2.383	3.523	2.032	-10.443	33.346
1	3	BB_A603G604:U669U670_BB	0.199	-1.796	2.809	-5.262	7.234	23.473	-5.784	-1.658	2.078	17.01	12.373	25.098
1	25	BB_A614G615:C6484SU608_BB	2.445	-3.38	2.88	3.273	4.708	-65.595	2.939	2.37	2.978	-4.337	3.015	-65.818
1	17	BB_A641G642:C628U629_BB	-0.463	-1.973	3.536	3.755	12.929	31.93	-5.241	1.338	2.505	22.305	-6.478	34.584
1	5	BB_C605G606:C667G668_BB	0.286	-1.918	3.285	3.771	10.057	28.626	-5.469	0.141	2.5	19.495	-7.31	30.535
1	24	BB_C613A614:4SU608G622_BB	-1.195	-0.409	3.165	2.762	-1.932	60.677	-0.315	1.31	3.123	-1.911	-2.732	60.761
1	14	BB_C638G639:C631C632_BB	0.87	-0.986	3.371	-4.238	12.12	42.369	-2.424	-1.545	2.901	16.326	5.709	44.186
1	16	BB_C640A641:U629G630_BB	-0.019	-1.752	3.068	0.456	13.494	29.628	-5.087	0.1	2.092	24.829	-0.84	32.497
1	9	BB_C650G651:C663G664_BB	0.028	-1.515	3.266	2.11	11.724	28.277	-4.976	0.327	2.454	22.761	-4.096	30.637
1	1	BB_G601G602:C671C672_BB	0.686	-2.349	3.58	4.8	8.856	30.677	-5.825	-0.37	2.88	16.201	-8.781	32.251
1	2	BB_G602A603:U670C671_BB	-0.552	-1.56	3.04	-2.132	9.707	30.489	-4.341	0.668	2.472	17.872	3.926	32.032
1	4	BB_G604C605:G668U669_BB	-0.102	-1.551	3.236	0.119	6.217	40.401	-2.874	0.159	2.975	8.937	-0.171	40.857
1	6	BB_G606G607:C666C667_BB	0.312	-1.755	3.168	-0.139	13.087	30.766	-4.934	-0.563	2.254	23.383	0.248	33.372
1	7	BB_G607G649:PSU665C666_BB	-0.208	-2.138	2.855	-0.784	4.401	28.137	-5.175	0.275	2.503	8.98	1.599	28.482
1	21	BB_G610U611:A624U625_BB	-0.066	-1.185	3.233	-0.235	6.015	43.381	-2.142	0.067	3.051	8.091	0.316	43.777
1	15	BB_G639C640:G630C631_BB	0.076	-1.872	3.044	-3.357	9.284	36.41	-3.936	-0.493	2.493	14.532	5.254	37.681
1	18	BB_G642G643:C627C628_BB	-0.246	-1.638	3.488	0.758	6.85	33.793	-3.846	0.535	3.1	11.634	-1.287	34.468
1	19	BB_G643G644:A626C627_BB	-1.385	-1.408	2.945	-2.076	7.645	32.149	-3.59	2.129	2.632	13.55	3.68	33.085
1	20	BB_G644G610:U625A626_BB	-3.209	-3.255	2.814	12.785	-0.18	60.214	-3.18	3.605	2.167	-0.178	-12.59	61.432
1	8	BB_G649C650:G664PSU665_BB	-0.245	-1.685	3.203	0.291	0.905	40.935	-2.505	0.381	3.165	1.294	-0.416	40.946
1	10	BB_G651G652:C662C663_BB	0.434	-1.744	3.271	0.097	6.21	33.327	-3.945	-0.731	2.91	10.713	-0.168	33.884
1	11	BB_G652G653:C661C662_BB	0.946	-1.874	3.519	5.089	3.797	30.007	-4.341	-0.72	3.373	7.231	-9.692	30.656
1	12	BB_G6535MU654:A658C661_BB	-2.816	-1.925	3.187	-0.713	-2.819	90.823	-1.296	1.963	3.25	-1.979	0.5	90.86
1	22	BB_U611U612:A623A624_BB	0.07	-1.314	3.317	0.541	8.406	31.976	-3.685	-0.034	2.889	14.938	-0.961	33.039
1	23	BB_U612C613:G622A623_BB	-0.116	-1.214	3.013	-2.152	2.263	31.408	-2.615	-0.15	2.922	4.168	3.963	31.559

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.