A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 1C0O  PDB ID: 1C0O 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_C5:G10_A1.032-0.721-0.839-2.624-4.836-1.515
11A_G1:C14_A-0.744-0.369-0.24-25.118-12.116-4.366
12A_G2:C13_A-0.75-0.476-0.133-3.997-14.346-2.522
13A_G3:U12_A-2.78-0.944-0.161-7.851-23.421-0.617
14A_U4:G11_A2.754-0.881-0.092-7.877-14.773-2.014
16A_U6:G9_A1.017-5.12-0.272-3.956-15.485-95.639

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.