A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
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NDB ID: PD0054  PDB ID: 1CL8 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
15B_DA6:DT9_B120
11B_DC2:DG13_B119
13B_DC4:DG11_B119
19B_DC10:DG5_B119
111B_DC12:DG3_B119
12B_DG3:DC12_B119
14B_DG5:DC10_B119
110B_DG11:DC4_B119
112B_DG13:DC2_B119
17B_DT8:PRN7_B00
18B_DT9:DA6_B120
16B_PRN7:DT8_B00

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)