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As of 27-Oct-2021 number of released structures: 11731
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NDB ID: PDT003  PDB ID: 1D66 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17DD_DA8DC9:DG30DT31_EE0.122-0.9063.3683.573-7.67438.358-0.380.273.476-11.508-5.35839.247
19DD_DA10DG11:DC28DT29_EE2.119-2.6432.9513.777-1.70771.816-2.198-1.6873.098-1.454-3.21771.919
11DD_DC1DC2:DG37DG38_EE0.9160.6483.45911.131-6.36633.4872.050.2513.408-10.579-18.49735.793
12DD_DC2DG3:DC36DG37_EE-1.2611.1243.259-2.1236.27333.8920.8851.7833.47510.6343.634.515
18DD_DC9DA10:DT29DG30_EE-0.679-0.2213.661-1.4182.68133.974-0.8540.9053.6584.5782.42134.105
112DD_DC13DC14:DG25DG26_EE-1.411-0.5593.111-4.356.732.15-2.071.773.09411.8717.70733.102
113DD_DC14DT15:DA24DG25_EE1.603-1.0343.563.8555.03430.768-2.944-2.173.5219.362-7.17131.399
115DD_DC16DC17:DG22DG23_EE-2.0270.6853.355-4.663-6.535.3382.062.5763.412-10.5417.56336.204
116DD_DC17DG18:DC21DG22_EE1.9760.7833.371.2433.20230.8880.814-3.4373.5065.99-2.32531.074
13DD_DG3DG4:DC35DC36_EE1.345-0.3173.5165.316-6.44535.060.508-1.3333.674-10.515-8.67336.011
14DD_DG4DG6:DC33DC35_EE-0.5340.4116.79-11.29710.15173.148-0.324-0.2976.8028.439.38174.492
15DD_DG6DG7:DC32DC33_EE0.161-0.0763.2628.1324.25124.672-1.3151.8433.1019.538-18.24626.298
16DD_DG7DA8:DT31DC32_EE-0.4081.1923.111-6.4912.70342.7161.36-0.0633.2033.6818.8443.264
110DD_DG11DT12:DA27DC28_EE-0.8311.5093.6451.3360.379-4.898-20.0821.563.613-4.31715.232-5.091
117DD_DG18DG19:DC20DC21_EE-1.3250.3053.3320.566.27545.072-0.1711.7653.3288.139-0.72645.488
111DD_DT12DC13:DG26DA27_EE0.2110.5373.4421.0790.68740.0950.7-0.1783.4551.002-1.57440.114
114DD_DT15DC16:DG23DA24_EE1.2850.6873.1849.3023.82733.9240.545-0.693.4616.387-15.52335.342

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.