A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: RR0005  PDB ID: 1DK1 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
111B_A19:U50_B120
119B_A27:G41_B18
19B_A52:U16_B424
14B_C4:G54_B119
18B_C15:G6_B119
112B_C20:G49_B119
123B_C32:G37_B119
11B_G1:C57_B119
12B_G2:U56_B128
13B_G3:C55_B119
15B_G12:U9_B20
16B_G13:C8_B119
17B_G14:C7_B119
110B_G18:C53_B119
113B_G21:C48_B119
114B_G22:C46_B119
116B_G24:C44_B119
117B_G25:C43_B119
118B_G26:U42_B128
120B_G28:G40_B00
121B_G30:U39_B028
122B_G31:C38_B119
115B_U23:A45_B120
124B_U33:G36_B528

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)