A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Sep-2022 number of released structures: 12282
Search for released structures

NDB ID: PD0113  PDB ID: 1DRG 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_DA2DT3:DA18DT19_CC-0.76-0.5113.4221.227-0.628.205-0.9021.8553.397-1.231-2.51628.237
13BB_DA4DA5:DT16DT17_CC0.7080.0162.972-2.0994.49827.848-0.908-1.8882.8789.2524.31928.278
14BB_DA5DC6:DG15DT16_CC0.868-1.1793.5082.802-1.12429.012-2.073-1.0573.616-2.235-5.57429.165
111BB_DA12DT13:DA8DT9_CC0.794-0.8443.237-0.1713.72431.973-2.17-1.4623.1176.7330.30932.184
113BB_DA14DG15:DC6DT7_CC-0.324-0.643.184-1.221-1.20134.893-0.8890.3583.213-2.0012.03534.934
15BB_DC6DT7:DA14DG15_CC0.128-0.6123.61.9899.11639.631-1.9760.0543.38613.224-2.88540.671
18BB_DC9DG10:DC11DG12_CC0.250.9983.289-1.5964.70234.8030.933-0.6593.3767.8122.65235.144
19BB_DG10DT11:DA10DC11_CC-0.160.0723.167-0.1316.19626.952-1.310.3053.10613.0750.27627.643
114BB_DG15DC16:DG5DC6_CC-0.073-0.3853.706-3.647-3.39832.106-0.009-0.5993.712-6.0996.54532.48
12BB_DT3DA4:DT17DA18_CC-0.3071.23.242.0220.3639.9331.7140.6793.2320.527-2.95839.983
16BB_DT7DT8:DA13DA14_CC-0.073-0.1473.0274.1440.53336.694-0.2990.6322.9980.844-6.55636.923
17BB_DT8DC9:DG12DA13_CC0.014-0.4843.231.3628.31830.184-2.4180.2242.99215.594-2.55431.312
110BB_DT11DA12:DT9DA10_CC0.526-0.813.4574.0633.37737.537-1.703-0.2613.4115.216-6.27637.894
112BB_DT13DA14:DT7DA8_CC-0.794-0.243.7621.697-9.39441.2930.7761.33.694-13.111-2.36942.335
115CC_DA1DT2:DA3DT4_CC0.105-0.8143.0254.1331.45236.378-1.4780.3562.9852.316-6.5936.631

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.