A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: 1DRR  PDB ID: 1DRR 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_DA2:U9_B0.082-0.02-0.266-2.015-7.204-1.918
13A_DA3:U8_B0.045-0.0020.1318.657-4.932-1.063
15A_DA5:U6_B0.1220.0180.0342.8070.632-6.156
17A_DA7:U4_B0.4680.040.0977.938-10.3384.027
18A_DA8:U3_B-0.04-0.0040.31511.5441.291.851
110A_DC10:G1_B0.005-0.12-0.6659.3945.483-4.541
11A_DG1:C10_B-0.394-0.109-0.328-5.207-2.793-2.181
14A_DG4:C7_B-0.133-0.017-0.0223.336-12.7141.313
16A_DG6:C5_B-0.374-0.0730.23213.937-2.438-1.683
19A_DG9:C2_B-0.124-0.038-0.3438.7193.186-2.181

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.