A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 1DSC  PDB ID: 1DSC 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_DA2:DT15_B0.566-0.082-0.1370.421-16.6685.921
13A_DA3:DT14_B-0.451-0.0360.095-0.954-5.94316.935
15A_DC5:DG12_B0.9560.1210.728-20.93819.14811.928
18A_DC8:DG9_B0.715-0.132-0.5658.847-5.9921.233
11A_DG1:DC16_B-0.676-0.142-0.567-8.757-6.2021.278
14A_DG4:DC13_B-1.053-0.1710.75820.09216.8488.96
16A_DT6:DA11_B-0.324-0.039-0.1982.576-9.45712.144
17A_DT7:DA10_B-0.548-0.053-0.124-0.484-16.485.829

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.