A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 1E95  PDB ID: 1E95 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
110A_A32:U10_A-0.13-0.035-0.139-0.817-2.798-6.263
12A_C2:G18_A-0.041-0.078-0.072-1.052-1.771-5.575
15A_C5:G15_A0.010.016-0.1670.782-0.4551.182
16A_C6:G14_A0.058-0.0860.274-1.011-8.375-8.479
112A_C34:G8_A0.036-0.0230.0241.17-1.646-6.765
11A_G1:C19_A-0.2440.041-0.0462.506-0.2253.266
13A_G3:C17_A-0.001-0.099-0.0662.3471.176-7.367
14A_G4:C16_A0.1760.064-0.02-1.14-0.585-2.437
18A_G30:C12_A0.3430.052-0.062-1.528-4.6332.205
19A_G31:C11_A0.022-0.007-0.072-2.254-3.2291.855
111A_G33:C9_A0.247-0.147-0.0190.797-5.134-2.378
17A_U29:A13_A-1.8820.194-0.024-1.317-2.392-28.564

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.