A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 9-Oct-2019 number of released structures: 10416
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NDB ID: PD0121  PDB ID: 1EGW 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11E_DA2:DT17_F120
12E_DA3:DT16_F120
16E_DA7:DT12_F120
19E_DA10:DT9_F120
112E_DA13:DT6_F120
14E_DC5:DG14_F119
114E_DC15:DG4_F119
13E_DG4:DC15_F119
113E_DG14:DC5_F119
15E_DT6:DA13_F120
17E_DT8:DA11_F120
18E_DT9:DA10_F120
110E_DT11:DA8_F120
111E_DT12:DA7_F120
115E_DT16:DA3_F120
116E_DT17:DA2_F10
117G_DA2:DT17_H120
118G_DA3:DT16_H120
122G_DA7:DT12_H120
123G_DA8:DT11_H120
125G_DA10:DT9_H120
126G_DA11:DT8_H120
128G_DA13:DT6_H120
120G_DC5:DG14_H119
130G_DC15:DG4_H119
119G_DG4:DC15_H119
129G_DG14:DC5_H119
121G_DT6:DA13_H120
124G_DT9:DA10_H120
127G_DT12:DA7_H120
131G_DT16:DA3_H120
132G_DT17:DA2_H120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)