A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: PR0024  PDB ID: 1EIY 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15CC_A5G6:C67U68_CC0.044-1.7263.376-6.00323.48735.985-4.405-0.5861.92133.7258.6243.164
122CC_A14G15:C48U8_CC3.802-1.9983.7429.0993.891-70.8461.5663.5953.388-3.3417.811-71.444
116CC_A43G44:A26U27_CC-0.216-2.8073.9541.206-7.34534.232-3.2320.5954.433-12.298-2.0235.008
12CC_C2C3:G70G71_CC-0.639-0.593.8873.7334.73135.304-1.7551.6663.6957.731-6.135.799
13CC_C3G4:C69G70_CC0.559-0.8273.97514.46232.52922.787-5.0740.9651.74753.359-23.72342.067
119CC_C11U12:A23G24_CC-0.637-1.6732.7592.6167.7233.592-3.751.3892.27613.118-4.44534.539
121CC_C13A14:U8G22_CC-3.6721.4243.365-5.816-8.12543.8792.6424.2453.496-10.7097.66544.947
113CC_C40G41:C29G30_CC1.277-1.1974.091-4.56812.64832.335-4.214-2.9293.20921.5847.79534.951
115CC_C42A43:U27G28_CC0.583-1.5022.8295.63411.84121.145-6.25-0.0441.83628.953-13.77724.841
18CC_C49G50:C64G65_CC0.032-1.212.880.50711.38827.47-4.3010.0242.21322.778-1.01529.699
110CC_C51G52:C62G63_CC-0.13-2.9443.211-4.66936.94335.685-5.042-0.0560.23547.3375.98351.133
11CC_G1C2:G71C72_CC0.702-2.6843.460.76222.59731.46-6.332-0.9861.32136.384-1.22738.575
14CC_G4A5:U68C69_CC-0.183-2.4964.004-5.4640.25321.48-6.612-2.0683.8990.66614.36322.158
16CC_G6G7:C66C67_CC-0.039-1.3723.1740.9268.2935.141-3.2990.1842.78713.497-1.50836.087
17CC_G7C49:G65C66_CC-0.256-2.8123.6444.591-1.87837.065-4.1071.0823.72-2.938-7.18237.383
118CC_G10C11:G24C25_CC-2.62-1.9722.747-6.28715.1134.498-4.5383.3862.15823.8869.93938.077
123CC_G18G19:C56U55_CC1.0654.4455.868-5.0874.22271.923.518-1.2116.0093.5874.32372.183
114CC_G41C42:G28C29_CC0.772-1.7383.8325.823-0.59436.347-2.656-0.2783.932-0.944-9.26136.8
117CC_G44G10:C25A26_CC-2.666-3.0482.44414.3766.20157.4-3.2723.1411.4896.327-14.66959.321
19CC_G50C51:G63C64_CC0.954-0.8593.43910.2546.04423.918-3.570.8293.25813.561-23.00826.677
111CC_G52G53:C61C62_CC-0.171-0.9453.7579.49331.46319.026-5.5381.4951.09358.145-17.54337.842
120CC_U12C13:G22A23_CC1.54-0.7033.767-2.7255.6638.171-1.842-2.7013.5178.5844.13238.666
112CC_U39C40:G30A31_CC0.663-2.3433.621-5.12110.45533.567-5.363-1.8312.66817.4648.55435.474

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.