1EIY: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: PR0024 PDB ID: 1EIY

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	CC_A5G6:C67U68_CC	0.044	-1.726	3.376	-6.003	23.487	35.985	-4.405	-0.586	1.921	33.725	8.62	43.164
1	22	CC_A14G15:C48U8_CC	3.802	-1.998	3.742	9.099	3.891	-70.846	1.566	3.595	3.388	-3.341	7.811	-71.444
1	16	CC_A43G44:A26U27_CC	-0.216	-2.807	3.954	1.206	-7.345	34.232	-3.232	0.595	4.433	-12.298	-2.02	35.008
1	2	CC_C2C3:G70G71_CC	-0.639	-0.59	3.887	3.733	4.731	35.304	-1.755	1.666	3.695	7.731	-6.1	35.799
1	3	CC_C3G4:C69G70_CC	0.559	-0.827	3.975	14.462	32.529	22.787	-5.074	0.965	1.747	53.359	-23.723	42.067
1	19	CC_C11U12:A23G24_CC	-0.637	-1.673	2.759	2.616	7.72	33.592	-3.75	1.389	2.276	13.118	-4.445	34.539
1	21	CC_C13A14:U8G22_CC	-3.672	1.424	3.365	-5.816	-8.125	43.879	2.642	4.245	3.496	-10.709	7.665	44.947
1	13	CC_C40G41:C29G30_CC	1.277	-1.197	4.091	-4.568	12.648	32.335	-4.214	-2.929	3.209	21.584	7.795	34.951
1	15	CC_C42A43:U27G28_CC	0.583	-1.502	2.829	5.634	11.841	21.145	-6.25	-0.044	1.836	28.953	-13.777	24.841
1	8	CC_C49G50:C64G65_CC	0.032	-1.21	2.88	0.507	11.388	27.47	-4.301	0.024	2.213	22.778	-1.015	29.699
1	10	CC_C51G52:C62G63_CC	-0.13	-2.944	3.211	-4.669	36.943	35.685	-5.042	-0.056	0.235	47.337	5.983	51.133
1	1	CC_G1C2:G71C72_CC	0.702	-2.684	3.46	0.762	22.597	31.46	-6.332	-0.986	1.321	36.384	-1.227	38.575
1	4	CC_G4A5:U68C69_CC	-0.183	-2.496	4.004	-5.464	0.253	21.48	-6.612	-2.068	3.899	0.666	14.363	22.158
1	6	CC_G6G7:C66C67_CC	-0.039	-1.372	3.174	0.926	8.29	35.141	-3.299	0.184	2.787	13.497	-1.508	36.087
1	7	CC_G7C49:G65C66_CC	-0.256	-2.812	3.644	4.591	-1.878	37.065	-4.107	1.082	3.72	-2.938	-7.182	37.383
1	18	CC_G10C11:G24C25_CC	-2.62	-1.972	2.747	-6.287	15.11	34.498	-4.538	3.386	2.158	23.886	9.939	38.077
1	23	CC_G18G19:C56U55_CC	1.065	4.445	5.868	-5.087	4.222	71.92	3.518	-1.211	6.009	3.587	4.323	72.183
1	14	CC_G41C42:G28C29_CC	0.772	-1.738	3.832	5.823	-0.594	36.347	-2.656	-0.278	3.932	-0.944	-9.261	36.8
1	17	CC_G44G10:C25A26_CC	-2.666	-3.048	2.444	14.376	6.201	57.4	-3.272	3.141	1.489	6.327	-14.669	59.321
1	9	CC_G50C51:G63C64_CC	0.954	-0.859	3.439	10.254	6.044	23.918	-3.57	0.829	3.258	13.561	-23.008	26.677
1	11	CC_G52G53:C61C62_CC	-0.171	-0.945	3.757	9.493	31.463	19.026	-5.538	1.495	1.093	58.145	-17.543	37.842
1	20	CC_U12C13:G22A23_CC	1.54	-0.703	3.767	-2.725	5.66	38.171	-1.842	-2.701	3.517	8.584	4.132	38.666
1	12	CC_U39C40:G30A31_CC	0.663	-2.343	3.621	-5.121	10.455	33.567	-5.363	-1.831	2.668	17.464	8.554	35.474

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.