A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: PD0130  PDB ID: 1EO4 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11C_DA3:DT10_D-0.124-0.050.1425.197-19.6077.802
13C_DA5:DT8_D-0.001-0.0890.6529.14-2.0851.983
15C_DA7:TSP6_D0.061-0.0190.042-13.5210.7593.014
17C_DC9:DG4_D0.16-0.2270.216-4.74-9.9353.982
12C_DG4:DC9_D-0.022-0.0680.1488.809-14.9273.587
16C_DT8:DA5_D-0.054-0.1790.198-0.981-1.1553.985
18C_DT10:DA3_D-0.328-0.1450.146-2.182-20.1085.277
19C_DT11:DA2_D0.159-0.349-0.1041.224-23.1439.263
14C_TSP6:DA7_D-0.355-0.141-0.25826.128-0.577-1.166

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.