A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: PD0130  PDB ID: 1EO4 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11CC_DA3DG4:DC9DT10_DD0.583-0.1623.223-1.0441.13633.118-0.471-1.1933.1971.9921.8333.153
13CC_DA5TSP6:DA7DT8_DD-0.403-1.4823.0546.932.24427.426-3.4912.2652.7444.631-14.328.36
15CC_DA7DT8:DA5TSP6_DD0.139-1.3693.197-0.1540.80530.315-2.775-0.2973.1591.5380.29530.326
17CC_DC9DT10:DA3DG4_DD-0.9660.0193.270.247-1.8132.2970.3541.7773.257-3.251-0.44432.347
12CC_DG4DA5:DT8DC9_DD-0.094-0.4953.467-8.144-17.09639.3361.153-0.743.353-23.79811.33743.494
16CC_DT8DC9:DG4DA5_DD-0.183-0.4973.5920.077-10.46137.3630.6860.2873.597-15.95-0.11838.749
18CC_DT10DT11:DA2DA3_DD-0.4430.5833.137-1.6614.89534.2230.2450.4953.2058.2592.80334.599
14CC_TSP6DA7:TSP6DA7_DD-0.132-1.5934.529-4.58152.47930.733-4.656-0.1371.04561.6085.37860.43

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.