1ESY: Base Pair Morphology Step Parameters

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As of 11-May-2022 number of released structures: 12077

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NDB ID: 1ESY PDB ID: 1ESY

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	AA_A5C6:G13A15_AA	4.734	0.47	3.325	-0.009	25.184	39.955	-1.64	-5.942	3.092	33.178	0.011	46.954
1	3	AA_C3G4:C16G17_AA	-0.112	0.008	4.502	2.116	13.004	30.154	-3.063	0.698	4.138	23.629	-3.845	32.845
1	6	AA_C6U7:A12G13_AA	-0.355	-0.565	3.245	-3.244	22.62	25.568	-4.346	0.118	2.11	41.978	6.02	34.164
1	1	AA_G1G2:C18C19_AA	-0.03	-0.161	2.676	-2.329	17.388	20.882	-3.862	-0.409	1.962	40.056	5.365	27.211
1	2	AA_G2C3:G17C18_AA	-0.036	-0.376	3.15	0.047	15.376	22.49	-4.405	0.088	2.403	34.693	-0.105	27.188
1	4	AA_G4A5:A15C16_AA	-0.466	-1.175	2.954	2.074	17.129	40.86	-2.9	0.781	2.284	23.321	-2.823	44.21

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.