A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Oct-2021 number of released structures: 11724
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NDB ID: TR0002  PDB ID: 1EVV 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
121AA_2MG10C11:G24C25_AA-0.954-1.6113.145-2.7544.62238.11-2.9871.1252.9967.0354.19238.474
116AA_5MC40U41:A29G30_AA0.776-1.6593.603-2.0774.90741.013-2.911-1.3373.356.9682.94941.343
18AA_5MC49U50:A64G65_AA-0.921-2.0963.197-1.4797.69829.017-5.4731.5032.6115.0212.88630.036
113AA_5MU54PSU55:G181MA58_AA2.144-2.3923.3346.6954.16143.579-3.577-2.2013.3815.55-8.93144.252
15AA_A5U6:A67U68_AA0.46-1.7143.481-0.2848.45828.412-5.121-0.9592.85816.7670.56329.621
125AA_A14G15:C48U8_AA2.419-3.4473.3240.9666.987-63.6382.9332.3273.612-6.6050.913-63.987
114AA_A38PSU39:A31OMC32_AA-0.236-1.3643.073-7.0110.9247.84-2.361-0.1872.72613.1858.46449.468
120AA_A442MG10:C25M2G26_AA-2.885-2.653.37914.54716.12858.78-3.1853.3511.96715.854-14.362.326
12AA_C2G3:C70G71_AA-0.086-1.3452.936-0.6742.4829.475-3.0970.0432.8174.8631.32229.584
122AA_C11U12:A23G24_AA-0.281-1.2043.261-1.1557.29532.327-3.2890.3062.93412.8922.04133.138
124AA_C13A14:U8G22_AA-2.385-0.2963.28-0.326-5.14457.862-0.032.4393.305-5.3050.33658.071
11AA_G1C2:G71C72_AA-0.675-2.1023.342-5.5979.23342.259-3.6960.3862.90512.5627.61543.555
13AA_G3G4:U69C70_AA0.228-1.8042.736-4.8998.53424.05-5.755-1.5061.91119.46911.17625.958
14AA_G4A5:U68U69_AA-0.22-1.3913.2532.0473.55542.953-2.2320.4963.1214.841-2.78843.14
118AA_G42G43:C27C28_AA-0.082-1.5153.2771.4545.73536.174-3.1710.3233.0059.161-2.32236.639
119AA_G43A44:M2G26C27_AA-0.675-1.0923.4125.6536.02638.404-2.3471.6823.0879.034-8.47439.25
110AA_G51U52:A62C63_AA0.264-1.3093.192-0.9923.3828.739-3.329-0.7373.0116.7771.9928.95
112AA_G535MU54:1MA58C61_AA-2.067-2.5773.1790.42-3.95991.352-1.7241.4523.257-2.766-0.29491.419
115AA_PSU395MC40:G30A31_AA0.005-1.4143.076-0.4997.12238.748-2.861-0.0622.78310.6250.74539.376
16AA_U6U7:A66A67_AA-0.186-1.2583.0781.9949.78734.681-3.2680.5522.62316.011-3.26236.048
17AA_U75MC49:G65A66_AA-0.461-2.0613.2590.6853.48534.275-4.0030.8813.0325.893-1.15834.453
123AA_U12C13:G22A23_AA1.734-2.0712.8485.6821.0427.192-4.542-2.3643.062.18-11.91527.788
117AA_U41G42:C28A29_AA-0.302-1.7793.023-0.1367.7626.076-5.4370.6132.40516.7320.29427.187
19AA_U50G51:C63A64_AA0.267-1.433.3350.9664.89231.549-3.476-0.3133.0918.927-1.76231.931
111AA_U52G53:C61A62_AA0.979-1.9753.3732.0477.78433.723-4.484-1.3372.91213.185-3.46834.643

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.