A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 1EXY  PDB ID: 1EXY 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
111A_A11:U18_A-0.738-0.224-0.233-17.753-16.466-12.212
14A_C4:G29_A0.852-0.267-0.469.589-5.343-10.061
16A_C6:G25_A0.763-0.3161.082-7.8057.992-3.405
17A_C7:G24_A-0.253-0.245-1.50321.137-6.007-8.874
112A_C12:G17_A1.06-0.1970.058-7.5083.089-1.409
11A_G1:C32_A-0.527-0.02-0.32-13.022-2.247-4.274
12A_G2:U31_A-1.655-0.2740.44218.1576.34-2.15
13A_G3:C30_A-0.98-0.234-0.2047.3953.798-4.79
15A_G5:C28_A-1.223-0.6150.475-13.325-21.747-12.665
18A_G8:C23_A-0.452-0.114-0.25.5359.955-11.779
19A_G9:C20_A0.6010.01.46730.5466.771-3.917
113A_G13:A16_A7.151-5.9230.7280.46211.534-18.626
110A_U10:A19_A0.806-0.3980.12914.768-25.581-9.566

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.