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As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0030  PDB ID: 1F7U 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
115B_2MG910:C925_B-0.189-0.0710.0666.99-4.6283.443
18B_5MC949:G965_B0.21-0.276-0.0784.707-12.5270.328
113B_5MU954:1MA958_B4.182-1.8860.201-8.1219.069-101.508
119B_A914:U908_B-4.216-2.0740.7959.37811.392-94.34
120B_A915:U948_B-0.0591.2230.071-5.36411.789163.417
110B_A951:U963_B-0.02-0.03-0.097-0.469-4.351-2.442
13B_C903:G970_B0.36-0.108-0.35912.632-13.2351.184
14B_C904:G969_B0.156-0.1060.1313.622-6.8841.309
16B_C906:G967_B0.156-0.107-0.0627.154-17.4883.362
116B_C911:G924_B0.172-0.072-0.2910.71-5.9413.11
117B_C912:G923_B0.238-0.176-0.1991.074.11.403
118B_C913:C922_B4.357-1.859-0.3287.889-4.7825.517
123B_C928:G942_B-0.01-0.187-0.1297.232-18.5554.564
19B_C950:G964_B0.106-0.1430.177-4.027-7.7032.277
17B_G907:C966_B-0.215-0.116-0.091-3.265-11.651-0.056
121B_G918:C956_B-0.194-0.030.042-22.137-17.215-1.212
125B_G930:C940_B-0.302-0.1730.081-6.167-7.244-0.688
126B_G931:C939_B-0.208-0.083-0.1064.3417.9390.857
111B_G952:C962_B-0.031-0.073-0.0475.274-7.228-1.358
112B_G953:C961_B-0.199-0.065-0.131-13.343-11.9090.801
11B_PSU901:A972_B-0.785-0.183-0.2189.951-16.208-6.848
122B_PSU927:A943_B-0.30.0410.03919.228-24.913-0.241
114B_PSU955:G917_B0.586-5.6650.44911.47919.52-99.852
12B_U902:A971_B-0.089-0.104-0.0345.992-12.8521.459
15B_U905:G968_B2.321-0.6330.0093.417-10.442-1.757
124B_U929:A941_B0.248-0.0470.182-1.636-10.2645.062

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.