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As of 25-May-2022 number of released structures: 12098
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NDB ID: PR0031  PDB ID: 1F7V 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
115B_2MG910:C925_B-0.695-0.368-0.0411.3870.3381.102
18B_5MC949:G965_B0.79-0.172-0.3484.823-9.6394.406
113B_5MU954:1MA958_B4.254-1.70.057-6.8027.245-102.545
119B_A914:U908_B-4.204-2.280.51210.9864.745-93.45
120B_A915:U948_B-0.0561.3560.064-3.415.709161.228
110B_A951:U963_B-0.007-0.199-0.139-2.144-4.005-4.462
13B_C903:G970_B0.011-0.267-0.1496.544-8.6481.653
14B_C904:G969_B0.283-0.279-0.2454.759-3.067-1.16
16B_C906:G967_B0.231-0.2620.1720.752-16.015.973
116B_C911:G924_B0.398-0.209-0.326-1.004-2.9192.766
117B_C912:G923_B0.22-0.205-0.1380.7918.2160.585
118B_C913:C922_B4.485-1.866-0.1412.251-3.24510.954
123B_C928:G942_B-0.052-0.375-0.2459.705-12.319-0.781
19B_C950:G964_B-0.084-0.1480.107-4.707-5.8932.627
17B_G907:C966_B-0.158-0.2270.064-0.389-10.6412.258
121B_G918:C956_B-0.044-0.0950.07928.738-19.99-1.456
125B_G930:C940_B-0.014-0.131-0.201-3.465-7.0990.256
126B_G931:C939_B-0.115-0.391-0.0511.3497.413-2.663
111B_G952:C962_B-0.21-0.3-0.1433.864-6.514-0.13
112B_G953:C961_B-0.182-0.027-0.14-14.635-10.7514.762
11B_PSU901:A972_B-0.762-0.207-0.2998.572-12.751-2.855
122B_PSU927:A943_B-0.24-0.318-0.02221.049-18.652-5.515
114B_PSU955:G917_B0.64-5.2690.8398.28126.396-97.233
12B_U902:A971_B-0.104-0.2080.1550.0-9.2251.42
15B_U905:G968_B2.287-0.518-0.0912.253-11.9811.676
124B_U929:A941_B-0.01-0.0530.14-1.895-2.2125.342

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.