A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: PR0031  PDB ID: 1F7V 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
114BB_2MG910C911:G924C925_BB-0.646-2.1913.412-0.0234.87240.243-3.710.933.1377.050.03340.525
18BB_5MC949C950:G964G965_BB-0.476-2.0483.496-4.1267.43730.986-5.0480.1152.97413.6017.54632.104
113BB_5MU954PSU955:G9171MA958_BB1.88-2.0283.817.2325.28136.95-3.909-1.8023.7838.185-11.2137.983
118BB_A914A915:U948U908_BB0.748-2.672.9912.6612.611-79.5711.7480.6473.293-9.7942.066-80.437
110BB_A951G952:C962U963_BB1.242-1.7183.1630.6287.18222.587-6.308-2.8392.53517.765-1.55523.695
13BB_C903C904:G969G970_BB-0.45-1.8743.245-1.1476.78631.754-4.4650.6172.8112.2222.06632.472
14BB_C904U905:G968G969_BB-0.135-1.3513.3381.0755.27738.929-2.6330.3283.1317.872-1.60339.285
16BB_C906G907:C966G967_BB-0.28-1.4443.061.4415.90128.86-4.7970.6991.99829.249-2.64832.9
115BB_C911C912:G923G924_BB-0.537-2.1423.312-0.3254.55930.455-4.8940.9492.9738.6170.61530.788
116BB_C912C913:C922G923_BB0.474-1.3262.9951.9364.41239.267-2.425-0.4962.8556.535-2.86839.55
117BB_C913A914:U908C922_BB-1.566-1.583.376-3.859-2.60656.248-1.5161.4263.531-2.7594.08556.424
120BB_C928U929:A941G942_BB0.002-2.1193.495-2.65212.5629.133-6.037-0.4612.39123.5794.97831.78
19BB_C950A951:U963G964_BB-0.771-1.5863.143.77411.22530.786-4.4541.9172.32720.229-6.80232.934
17BB_G9075MC949:G965C966_BB-0.581-1.0673.0934.0548.2941.111-2.2631.192.7711.629-5.68742.09
122BB_G930G931:C939C940_BB-0.008-2.3443.108-0.174.34626.873-5.956-0.0222.7029.2740.36327.216
111BB_G952G953:C961C962_BB1.023-2.0573.611.2216.11135.068-4.304-1.4863.24910.044-2.00635.6
112BB_G9535MU954:1MA958C961_BB-3.034-2.283.0912.926-2.97390.102-1.5532.1983.07-2.099-2.06690.178
11BB_PSU901U902:A971A972_BB-0.158-1.6173.448-8.0655.74140.267-2.916-0.6623.1718.1911.50541.417
119BB_PSU927C928:G942A943_BB-0.095-2.2363.482-0.0319.75336.279-4.7250.1442.80815.3250.04837.524
12BB_U902C903:G970A971_BB-0.325-1.5933.0430.374-0.21631.223-2.9210.6693.049-0.402-0.69531.226
15BB_U905C906:G967G968_BB0.031-1.6092.9860.41211.28726.603-5.2810.0132.13923.243-0.84828.861
121BB_U929G930:C940A941_BB0.548-1.9213.2535.2815.21930.038-4.573-0.0462.9379.88-9.99830.921

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.