A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1FMN  PDB ID: 1FMN 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
18A_A8:G28_A-0.8441.879-0.1-4.942-15.449-15.855
111A_A13:G24_A-7.153-4.7480.1272.646-1.647-17.889
13A_C3:G33_A0.703-0.303-0.59211.33830.081-10.672
114A_C16:G21_A0.171-0.0590.2017.1351.265-9.153
11A_G1:C35_A-0.1370.0750.1124.882-5.95-3.993
12A_G2:C34_A-0.493-0.39-0.875-24.4227.826-13.141
14A_G4:C32_A0.1340.0730.379-18.046-2.942-3.337
16A_G6:C30_A0.39-0.0410.114-16.585-25.151-11.173
19A_G9:G27_A3.9531.498-0.265-9.685-5.766-22.641
113A_G15:C22_A0.0280.085-0.059-0.88-3.008-4.117
15A_U5:A31_A0.140.0630.079-2.295-7.344-13.896
17A_U7:A29_A0.2180.0540.722-3.05-2.744-9.78
110A_U12:A25_A4.377-1.7730.0427.433-8.704-104.839
112A_U14:A23_A-0.4230.0460.0268.511-1.14-2.975
115A_U17:G20_A0.568-6.6931.0490.946-23.886-100.635

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.