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As of 18-May-2022 number of released structures: 12082
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NDB ID: PD0267  PDB ID: 1GM5 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12XX_DA2DG3:DC18DT19_YY0.26-0.1013.0950.3320.46835.716-0.229-0.3783.0960.763-0.54135.721
18XX_DA8DT9:DA12DT13_YY-0.104-0.7573.489-3.297-3.46125.749-0.654-0.743.543-7.6827.31826.181
11XX_DC1DA2:DT19DG20_YY0.607-0.2763.86-13.9036.42731.908-1.54-3.3483.21710.93823.66235.307
14XX_DC4DT5:DA16DG17_YY-0.233-0.2144.405-9.53711.83832.122-2.7-1.5113.99420.05216.15435.452
16XX_DC6DC7:DG14DG15_YY-0.02-0.3642.7244.2580.39332.076-0.7110.6612.6950.708-7.66432.353
17XX_DC7DA8:DT13DG14_YY-0.105-0.0223.036-0.79.30737.55-1.0970.0782.94914.1911.06838.651
13XX_DG3DC4:DG17DC18_YY0.811-0.9623.8914.6150.64929.401-1.8451.7063.8351.19-26.80632.768
15XX_DT5DC6:DG15DA16_YY0.644-1.0943.7595.0961.09142.868-1.611-0.2963.781.487-6.94243.168
19XX_DT9DG10:DC11DA12_YY1.535-0.9182.5717.5518.24684.646-0.982-0.8012.59313.295-12.78887.661
112YY_DA3DG4:DC6DT7_ZZ-0.481-0.7653.293-4.33610.18534.034-2.6950.1682.98616.8567.17535.738
111YY_DC2DA3:DT7DG8_ZZ-1.082-0.6342.8771.994.51336.812-1.5131.9282.7237.107-3.13437.13
116YY_DC7DT8:DA2DG3_ZZ-0.1780.0093.183-0.2822.1631.946-0.3630.2743.1783.9180.51232.018
110YY_DG1DC2:DG8DC9_ZZ-0.399-0.6923.3861.038-2.21830.822-0.8510.9583.411-4.165-1.9530.917
113YY_DG4DT5:DA5DC6_ZZ-0.815-0.8093.541-2.051-1.22532.751-1.2011.0573.611-2.1693.63132.836
115YY_DG6DC7:DG3DC4_ZZ-0.071-0.743.403-0.3445.85229.618-2.6350.0663.20111.3080.66430.18
114YY_DT5DG6:DC4DA5_ZZ0.588-0.043.2153.3352.09133.777-0.4-0.4773.2483.583-5.71633.999
117YY_DT8DC9:DG1DA2_ZZ1.545-0.1243.3098.627.44638.858-1.065-1.2093.4810.91-12.6340.431

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.