A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1GUC  PDB ID: 1GUC 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_A2:U15_B-0.092-0.010.1646.2150.401-0.245
16A_C6:G11_B0.026-0.108-0.032-6.128-8.2360.894
18A_C8:G9_B-0.132-0.0750.009-3.81-6.162-1.349
11A_G1:C16_B0.055-0.090.036.59-9.227-0.866
13A_G3:C14_B0.084-0.092-0.0195.364-7.4910.791
14A_G4:U13_B-1.791-0.406-0.005-0.782-9.071-6.416
15A_U5:G12_B1.789-0.412-0.0181.44-9.256-6.654
17A_U7:A10_B0.074-0.0090.234-8.090.5990.006

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.