A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
Search for released structures

NDB ID: 1HHW  PDB ID: 1HHW 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14A_DA4:U15_B-0.47-0.1050.36614.803-17.998-7.302
16A_DA6:U13_B-0.048-0.037-0.481-2.888-1.3164.507
11A_DC1:G18_B0.589-0.109-0.09621.222-27.121-2.817
19A_DC9:G10_B0.3550.0080.023-1.952-8.382-1.55
13A_DG3:C16_B-0.756-0.1490.25912.411-11.839-2.194
18A_DG8:C11_B-0.578-0.0460.53313.132-5.919-2.402
12A_DT2:A17_B0.693-0.108-0.22422.375-24.8833.677
17A_DT7:A12_B0.6-0.114-0.8373.763-10.4521.204
15A_TLN5:A14_B0.658-0.0310.3429.912-9.8370.721

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.