A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: PD0192  PDB ID: 1HLV 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
112BB_DA12DA13:DT9DT10_CC0.638-0.3523.31-0.6231.79332.187-0.955-1.2613.2733.2311.12332.242
113BB_DA13DA14:DT8DT9_CC-0.185-0.1443.588-4.06-2.54940.0330.108-0.2373.591-3.7075.90540.307
114BB_DA14DC15:DG7DT8_CC-0.82-1.0343.321-4.3687.64630.594-3.280.73.06414.1278.0731.807
119BB_DA19DT20:DA2DT3_CC-0.313-0.6113.281-1.2651.79736.243-1.2320.3263.2572.8862.03236.307
12BB_DC2DC3:DG19DG20_CC0.808-0.1723.1673.3713.04832.871-0.802-0.8623.2035.354-5.92233.175
13BB_DC3DT4:DA18DG19_CC-0.469-0.3033.270.7011.59728.166-0.9921.1243.2363.277-1.43828.218
16BB_DC6DG7:DC15DG16_CC1.0161.0933.3664.2436.71236.0360.749-0.9873.59710.69-6.75936.872
115BB_DC15DG16:DC6DG7_CC0.3631.1143.2136.1916.20131.6240.8790.453.37411.114-11.09732.785
11BB_DG1DC2:DG20DC21_CC-0.739-0.3553.317-2.9360.25235.974-0.610.7693.3620.4074.74436.091
17BB_DG7DT8:DA14DC15_CC-0.2790.6723.135-1.2481.61431.9590.9380.2883.1732.9282.26332.022
110BB_DG10DG11:DC11DC12_CC1.3670.4983.5135.047-6.24535.0241.782-1.433.531-10.211-8.25335.904
111BB_DG11DA12:DT10DC11_CC-1.20.4893.289-1.6290.52837.9580.6831.6333.3420.8122.50437.995
116BB_DG16DG17:DC5DC6_CC0.440.5762.931-2.64412.20423.068-1.822-1.6422.80728.0356.07526.191
117BB_DG17DG18:DC4DC5_CC-0.3610.1243.5781.004-0.07937.0440.2070.7143.567-0.124-1.57937.058
118BB_DG18DA19:DT3DC4_CC0.315-0.4753.477-1.547-0.13539.927-0.679-0.653.465-0.1982.26439.956
14BB_DT4DT5:DA17DA18_CC-0.588-0.2823.214-0.882.08136.311-0.7360.8223.2063.3361.4136.379
15BB_DT5DC6:DG16DA17_CC0.4550.6843.4960.5951.81944.940.719-0.5373.5252.378-0.77844.978
18BB_DT8DT9:DA13DA14_CC1.550.7733.1424.7444.1535.660.658-1.8253.386.713-7.67336.195
19BB_DT9DG10:DC12DA13_CC-0.9960.893.355-5.953-3.79242.3891.6050.7493.37-5.2018.16442.946
120BB_DT20DT21:DA1DA2_CC-0.67-0.0613.1621.4762.02234.655-0.3991.3393.1233.39-2.47434.742

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.