1HS3: Base Pair Morphology Step Parameters

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As of 11-May-2022 number of released structures: 12077

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NDB ID: 1HS3 PDB ID: 1HS3

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	2	AA_C2G3:C10G11_AA	0.199	-1.895	3.285	0.483	19.921	28.191	-5.79	-0.274	1.632	35.793	-0.868	34.405
1	1	AA_G1C2:G11C12_AA	-0.064	-1.837	2.912	1.21	-0.085	32.155	-3.3	0.307	2.912	-0.154	-2.183	32.177
1	3	AA_G3U4:U9C10_AA	0.516	-1.365	2.854	-6.641	1.815	37.219	-2.304	-1.522	2.659	2.815	10.297	37.828

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.