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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID:
1HS4
PDB ID:
1HS4
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
2
A_C2:G11_A
-0.334
0.036
0.165
0.051
-16.426
-2.452
1
1
A_G1:C12_A
-0.536
-0.127
0.096
-7.021
-19.782
-2.104
1
3
A_G3:C10_A
0.12
-0.01
-0.123
-2.792
-21.954
0.642
1
4
A_U4:U9_A
2.114
-1.761
0.661
8.221
-19.602
9.277
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.
