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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID:
1HS8
PDB ID:
1HS8
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
2
A_C2:G11_A
-0.169
-0.07
-0.062
3.489
-16.601
-1.029
1
1
A_G1:C12_A
-0.78
-0.276
0.01
-3.611
-15.759
-0.947
1
3
A_G3:C10_A
0.15
-0.085
-0.389
-9.092
-20.931
1.658
1
4
A_U4:U9_A
2.253
-1.775
0.447
-0.925
-17.192
11.337
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.
