A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: 1HZ0  PDB ID: 1HZ0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_DA3:DT20_B-0.085-0.1340.043-0.602-6.95-1.72
18A_DA9:DT14_B0.089-0.1190.062.11-7.857-2.768
11A_DC1:DG22_B0.113-0.059-0.1522.927-3.042-0.818
12A_DC2:DG21_B0.151-0.1180.0840.116-4.508-1.77
15A_DC5:DG18_B0.176-0.0940.1271.35-11.341-0.835
16A_DC7:DG16_B0.219-0.146-0.13911.026-16.011-2.705
19A_DC10:DG13_B0.176-0.0930.0694.726-8.413-0.796
110A_DC11:DG12_B0.192-0.111-0.0044.494-6.957-1.49
14A_DT4:DA19_B-0.05-0.110.1094.235-11.786-0.286
17A_DT8:DA15_B-0.021-0.001-0.017-15.164-19.1918.733

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.