A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
Search for released structures

NDB ID: 1HZ0  PDB ID: 1HZ0 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13AA_DA3DT4:DA19DT20_BB0.064-0.3282.937-0.257-2.14437.846-0.257-0.1282.95-3.3020.39537.905
18AA_DA9DC10:DG13DT14_BB-0.401-0.4622.911-2.152-0.37336.937-0.6840.3732.933-0.5883.39236.999
11AA_DC1DC2:DG21DG22_BB-0.324-0.6683.122-3.287-0.37237.197-0.9960.093.144-0.5815.1437.339
12AA_DC2DA3:DT20DG21_BB0.001-0.5732.9270.094.01834.391-1.5110.0112.8446.767-0.15234.618
15AA_DC5DC7:DG16DG18_BB-0.34-2.1235.3140.66927.368.294-3.1560.3194.31923.395-0.57372.932
16AA_DC7DT8:DA15DG16_BB1.874-0.213.21411.1377.2740.375-1.07-1.3953.50310.203-15.63142.422
19AA_DC10DC11:DG12DG13_BB-0.111-0.4343.025-0.603-0.32638.373-0.6230.0993.029-0.4950.91738.379
14AA_DT4DC5:DG18DA19_BB0.347-0.9052.96-0.0310.05237.788-1.404-0.542.9590.0810.04837.788
17AA_DT8DA9:DT14DA15_BB-0.420.7752.733-3.1297.17534.930.3670.2942.85711.7715.13335.769

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.