1HZS: Base Pair Morphology Step Parameters

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As of 18-May-2022 number of released structures: 12082

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NDB ID: UP0002 PDB ID: 1HZS

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_APN3TPN4:APN11TPN12_BB	-0.172	-2.842	3.571	-1.34	-2.041	23.278	-6.223	-0.091	3.806	-5.041	3.31	23.404
1	2	AC_CPN6CPN22:GPN25GPN9_DB	-3.562	3.118	3.056	-0.396	-0.652	177.558	1.56	1.782	3.056	-0.326	0.198	177.558
1	3	CC_APN19TPN20:APN27TPN28_DD	-0.239	-2.705	3.534	-0.768	2.735	-24.064	5.469	-0.844	3.804	-6.53	-1.835	-24.228

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.