A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: AD0011  PDB ID: 1I0F 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16AA_1276DA7:DT14DA15_BB-0.279-1.4733.1081.67715.1731.117-4.4720.692.16226.383-2.91634.575
15AA_DA51276:DA1512716_BB0.817-1.4283.0791.3794.78531.62-3.381-1.2542.878.713-2.51232.0
17AA_DA7DC8:DG13DT14_BB0.128-1.6823.2770.4063.01231.748-3.597-0.1613.115.49-0.74131.89
12AA_DC2DG3:DC18DG19_BB0.324-2.0713.573-0.32411.23625.833-6.802-0.7392.46923.7520.68628.135
18AA_DC8DG9:DC12DG13_BB-0.148-1.9553.4260.15311.78228.495-5.8310.3072.44322.746-0.29630.789
11AA_DG1DC2:DG19DC20_BB0.318-1.3853.1093.7370.99439.416-2.155-0.0543.0911.469-5.52439.598
13AA_DG3DT4:DA17DC18_BB-1.235-1.4933.1-2.1225.30736.179-3.0521.6962.9258.4813.3936.613
19AA_DG9DC10:DG11DC12_BB0.222-1.7373.370.9331.45635.153-3.094-0.2253.3032.41-1.54335.194
14AA_DT4DA5:12716DA17_BB0.67-1.6843.1020.87519.14226.568-5.634-1.0711.58336.262-1.65832.656

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.