A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Nov-2019 number of released structures: 10455
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NDB ID: AD0012  PDB ID: 1I0G 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16A_1256:DA15_B-0.125-0.060.145.184-13.2124.196
15A_DA5:12516_B0.255-0.0420.122-2.838-11.45-3.851
17A_DA7:DT14_B-0.065-0.144-0.0354.464-11.4133.094
12A_DC2:DG19_B0.16-0.0860.1146.503-14.7431.803
18A_DC8:DG13_B0.221-0.199-0.1466.331-12.0282.14
110A_DC10:DG11_B0.3-0.160.211-2.3022.6840.137
11A_DG1:DC20_B-0.28-0.2320.1963.005-9.902-1.769
13A_DG3:DC18_B-0.345-0.140.0-9.73-18.6980.783
19A_DG9:DC12_B-0.025-0.10.158-5.611-10.0252.686
14A_DT4:DA17_B-0.173-0.13-0.121-3.069-17.1440.625

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.