1I0P: Base Pair Morphology Step Parameters

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As of 23-Nov-2022 number of released structures: 12471

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NDB ID: AD0018 PDB ID: 1I0P

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	6	AA_1266DA7:DT14DA15_BB	-0.211	-1.39	3.146	0.073	14.589	31.763	-4.258	0.362	2.306	25.069	-0.125	34.875
1	5	AA_DA51266:DA1512616_BB	0.684	-1.383	3.135	2.362	4.25	30.861	-3.325	-0.85	2.966	7.925	-4.405	31.232
1	7	AA_DA7DC8:DG13DT14_BB	0.222	-1.647	3.277	1.476	3.292	32.45	-3.489	-0.144	3.106	5.868	-2.63	32.645
1	2	AA_DC2DG3:DC18DG19_BB	0.338	-2.231	3.439	0.35	8.913	24.442	-7.252	-0.662	2.488	20.211	-0.794	25.996
1	8	AA_DC8DG9:DC12DG13_BB	-0.148	-2.006	3.405	-2.453	10.766	29.2	-5.657	-0.162	2.528	20.455	4.66	31.175
1	1	AA_DG1DC2:DG19DC20_BB	0.427	-1.441	3.18	1.704	1.517	40.282	-2.254	-0.433	3.14	2.2	-2.472	40.344
1	3	AA_DG3DT4:DA17DC18_BB	-1.054	-1.494	3.146	0.395	5.683	36.063	-3.113	1.734	2.875	9.109	-0.634	36.496
1	9	AA_DG9DC10:DG11DC12_BB	0.046	-1.909	3.353	2.765	0.31	33.37	-3.367	0.386	3.328	0.539	-4.804	33.482
1	4	AA_DT4DA5:12616DA17_BB	0.624	-1.657	2.971	0.335	20.344	27.226	-5.305	-1.031	1.43	37.317	-0.614	33.873

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.