A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Nov-2022 number of released structures: 12471
Search for released structures

NDB ID: AD0019  PDB ID: 1I0Q 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16A_1266:DA15_B-0.069-0.0620.2415.472-13.3694.225
15A_DA5:12616_B0.234-0.0590.207-2.049-12.939-4.815
17A_DA7:DT14_B-0.049-0.1060.0665.239-11.9352.934
12A_DC2:DG19_B0.132-0.0840.1494.351-13.4731.361
18A_DC8:DG13_B0.22-0.142-0.16.871-12.4790.862
110A_DC10:DG11_B0.295-0.120.106-1.6486.059-0.551
11A_DG1:DC20_B-0.278-0.1840.2823.748-8.741-2.441
13A_DG3:DC18_B-0.364-0.12-0.061-10.291-13.4871.896
19A_DG9:DC12_B-0.014-0.2210.229-4.398-10.7620.795
14A_DT4:DA17_B-0.161-0.144-0.108-4.814-16.6061.584

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.