A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1IE1  PDB ID: 1IE1 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16A_A6:U17_A-4.035-1.847-0.23-8.125-3.287-91.566
17A_A7:A15_A4.603-5.192-0.1457.943.066165.505
13A_C3:G20_A0.157-0.24-0.1951.506-2.247-6.17
14A_C4:G19_A1.273-0.298-0.066-2.121-1.1233.783
11A_G1:C22_A-0.044-0.521-0.1033.6841.663-2.984
12A_G2:C21_A-0.314-0.0760.1031.866-0.105-4.507
15A_G5:A18_A6.273-3.8210.1271.35-0.54-2.828
18A_U9:A14_A0.5550.1950.81119.24830.46365.636

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.