A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: AH0018  PDB ID: 1IHA 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_C2:G7_B0.042-0.2030.1051.6-11.076-1.406
15A_C5:U4_B0.6720.148-0.3388.015-5.468-41.341
18A_C8:G1_B0.239-0.1740.209-3.848-4.159-0.711
11A_G1:C8_B-0.38-0.1930.213.275-13.1290.005
16A_G6:U3_B-2.305-0.61-0.2011.264-9.432-1.96
17A_G7:C2_B-0.163-0.157-0.066-5.217-13.13-0.148
13A_U3:G6_B2.265-0.544-0.0655.165-8.15-2.79
14A_U4:C5_B-0.6210.1860.0371.7962.564-41.94

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.