A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0092  PDB ID: 1J1U 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
127B_A514:U508_B424
115B_A537:U534_B00
116B_A539:C533_B10
122B_A545:G527_B08
11B_C501:G573_B119
12B_C502:G572_B119
15B_C505:G569_B119
126B_C513:G523_B119
118B_C541:G531_B10
119B_C542:G530_B119
121B_C544:G528_B119
19B_C551:G565_B119
13B_G503:C571_B119
14B_G504:C570_B119
16B_G506:C568_B119
17B_G507:C567_B119
123B_G510:C526_B119
128B_G515:C549_B222
129B_G520:C557_B119
120B_G543:C529_B119
18B_G550:C566_B119
111B_G553:C563_B119
112B_G554:C562_B119
124B_U511:A525_B120
125B_U512:A524_B120
117B_U540:A532_B120
110B_U552:G564_B128
113B_U555:A559_B424
114B_U556:G519_B20

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)