A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 28-Sep-2022 number of released structures: 12311
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NDB ID: PD0220  PDB ID: 1JEY 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
17C_DA7:DT28_D120
112C_DA12:DT23_D120
118C_DC18:DG4_D119
11C_DG1:DC34_D119
18C_DG8:DC27_D119
115C_DG15:DC7_D119
116C_DG16:DC6_D119
117C_DG17:DC5_D119
12C_DT2:DA33_D120
13C_DT3:DA32_D120
14C_DT4:DA31_D120
15C_DT5:DA30_D120
16C_DT6:DA29_D120
19C_DT9:DA26_D120
110C_DT10:DA25_D120
111C_DT11:DA24_D120
113C_DT13:DA22_D120
114C_DT14:DA21_D120
119D_DA8:DT20_D120
121D_DC10:DG18_D119
120D_DG9:DC19_D119
122D_DT11:DA17_D120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)