A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: PD0224  PDB ID: 1JFT 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11BB_DA700DC701:DG714DT715_BB-0.121-0.5453.189-10.0977.5827.491-2.53-1.7442.81414.98819.96630.2
15BB_DA704DA705:DT710DT711_BB-0.0960.4833.224.364-0.28734.290.8570.8243.18-0.485-7.36434.559
16BB_DA705DA706:DT709DT710_BB0.6240.0853.104-6.0177.53737.187-0.754-1.6542.93311.5829.24638.374
17BB_DA706DC707:DG708DT709_BB-1.075-0.1083.6362.342-0.11527.664-0.1952.863.535-0.24-4.88627.762
12BB_DC701DG702:DC713DG714_BB-1.545-0.7843.287-2.418-3.9539.11-0.6821.9983.432-5.8763.59639.373
14BB_DC703DA704:DT711DG712_BB0.7641.243.669-1.8361.78138.7291.622-1.4023.6822.6812.76538.81
18BB_DC707DG708:DC707DG708_BB0.01.335.3250.052.64124.135-4.3820.03.51167.090.057.549
114BB_DC713DG714:DC701DG702_BB1.545-0.7843.2872.418-3.9539.11-0.682-1.9983.432-5.876-3.59639.373
13BB_DG702DC703:DG712DC713_BB-0.83-0.3363.3811.128-1.48921.827-0.2882.6363.349-3.924-2.97321.906
19BB_DG708DT709:DA706DC707_BB1.075-0.1083.636-2.342-0.11527.664-0.195-2.863.535-0.244.88627.762
113BB_DG712DC713:DG702DC703_BB0.83-0.3363.381-1.128-1.48921.827-0.288-2.6373.349-3.9242.97321.906
115BB_DG714DT715:DA700DC701_BB0.121-0.5453.18910.0977.57927.491-2.531.7442.81414.988-19.96630.2
110BB_DT709DT710:DA705DA706_BB-0.6240.0853.1046.0177.53737.187-0.7541.6542.93311.582-9.24638.374
111BB_DT710DT711:DA704DA705_BB0.0960.4833.22-4.364-0.28734.290.857-0.8243.18-0.4857.36434.559
112BB_DT711DG712:DC703DA704_BB-0.7641.243.6691.8361.78138.7291.6221.4023.6822.681-2.76538.81

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.