A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 1JVC  PDB ID: 1JVC 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_DA2:DT8_B-1.017-0.7690.634-5.424-11.853-3.119
12A_DG3:DG7_B-0.301-3.9410.0041.245-8.09795.763
14A_DG6:DC4_B0.191-0.165-0.46-6.7425.93-12.865
13A_DG7:DG3_B0.3023.936-0.057-1.2448.105-95.583
16A_DT8:DA2_B-1.008-0.767-0.58-5.449-11.8752.983
15B_DG6:DC4_A0.188-0.156-0.407-6.7945.893-12.982

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.