A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Nov-2022 number of released structures: 12471
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NDB ID: PD0250  PDB ID: 1JWL 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15DD_DA10DG11:DC14DT15_EE0.8440.2653.3240.152-6.44734.9071.39-1.3633.229-10.635-0.25235.48
110DD_DA15DT16:DA9DT10_EE-1.0690.8043.78910.624-19.571-31.0511.9750.1013.80631.92617.332-38.05
112DD_DA17DA18:DT7DT8_EE0.1640.6342.402-8.248-1.44936.8731.114-1.0252.289-2.25612.83737.78
113DD_DA18DC19:DG6DT7_EE0.223-0.4773.3581.013-3.0441.235-0.339-0.2033.388-4.308-1.43641.354
17DD_DC12DG13:DC12DG13_EE-0.4351.8365.0030.95553.43720.85-4.1120.5633.58770.219-1.25557.089
12DD_DG7DT8:DA17DC18_EE-0.725-1.3393.098-4.716.82632.108-3.4070.542.83712.0918.34233.134
14DD_DG9DA10:DT15DC16_EE-1.5960.1433.716-7.7941.85132.276-0.121.2323.9843.26813.75733.229
16DD_DG11DC12:DG13DC14_EE-0.581-0.8033.4390.4113.55830.695-2.2231.1733.3196.693-0.77330.898
18DD_DG13DG14:DC11DC12_EE1.032-0.9632.8371.204-3.1629.009-1.298-1.8142.963-6.281-2.39429.201
19DD_DG14DA15:DT10DC11_EE0.702-0.6754.006-12.31611.84794.538-0.706-0.7343.8368.0148.33195.708
11DD_DT6DG7:DC18DA19_EE-1.7270.3282.923.8352.81642.0660.2032.7342.7753.908-5.32242.322
13DD_DT8DG9:DC16DA17_EE-0.110.9323.3891.333.46836.5810.9820.3643.4545.508-2.11336.763
111DD_DT16DA17:DT8DA9_EE0.8521.5623.6168.18415.86735.29-0.01-0.0644.0324.345-12.55739.42

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.