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As of 30-Nov-2022 number of released structures: 12490
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NDB ID: PD0255  PDB ID: 1K4S 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
18BB_5IU95IU10:DA113DA114_DD0.317-0.6263.5624.2442.48734.488-1.4580.1743.5234.168-7.11434.826
19BC_5IU10SPT11:DA112DA113_DD0.079-0.3853.50411.594-3.1429.278-0.0752.1873.319-5.908-21.81531.596
11BB_DA2DA3:5IU1205IU121_DD-0.721-0.2993.37-0.1151.41129.44-0.8971.3923.3552.7740.22729.473
12BB_DA3DA4:5IU1195IU120_DD0.047-0.6943.23-5.526-9.06240.55-0.014-0.653.272-12.8127.81241.859
13BB_DA4DA5:5IU1185IU119_DD0.226-0.5073.8555.051-3.2335.356-0.2720.4963.879-5.272-8.24335.845
14BB_DA5DG6:DC1175IU118_DD0.076-1.1863.409-1.218-4.85431.262-1.216-0.3793.543-8.9362.24331.65
16BB_DA7DC8:DG1155IU116_DD0.108-0.5073.2578.033-3.79427.017-0.151.6493.197-7.855-16.63328.414
17BB_DC85IU9:DA114DG115_DD0.331-0.4523.0880.179-10.96947.3550.263-0.393.115-13.447-0.2248.538
15BB_DG6DA7:5IU116DC117_DD-0.221-0.5292.853-5.8672.89433.604-1.298-0.432.7964.94810.0334.217
117CC_5IU185IU19:DA104DA105_DD0.096-0.1923.899-2.197-7.50636.1310.91-0.5073.849-11.933.49236.94
118CC_5IU195IU20:DA103DA104_DD0.491-0.7833.1731.511-3.89934.445-0.723-0.5953.257-6.555-2.5434.691
119CC_5IU205IU21:DA102DA103_DD-0.24-0.1042.7067.989-1.01436.712-0.0521.2292.601-1.586-12.49937.555
112CC_DA13DA14:5IU1095IU110_DD0.129-0.8882.599-5.9510.01930.997-1.636-1.1142.530.03511.00831.549
113CC_DA14DA15:5IU1085IU109_DD-0.298-0.9533.271-2.085-6.82734.079-0.520.1713.404-11.4923.51134.797
114CC_DA15DA16:5IU1075IU108_DD0.3-0.7333.5381.57-5.67140.286-0.363-0.243.613-8.18-2.26540.696
115CC_DA16DA17:DT1065IU107_DD-0.107-0.0863.251-0.258-7.15740.6990.6450.1233.221-10.1950.36841.298
116CC_DA175IU18:DA105DT106_DD0.193-1.3683.2394.0850.58629.886-2.7460.4533.2091.129-7.87430.163
111CC_DG12DA13:5IU110DC111_DD-0.1430.0443.4990.0389.70131.482-1.70.2593.36417.369-0.06832.906
110CC_SPT11DG12:DC111DA112_DD-0.0240.2043.17-0.5590.10239.9720.287-0.0283.1710.1490.81839.976

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.